Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020213.1 Corchorus olitorius cultivar O-4 contig20246, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73198

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1124--1167
21
2.0
22
95
4
81
36
13
0
50
1.42
24548--24572
7
3.6
7
100
0
50
60
0
40
0
0.97
26807--27084
139
2.0
139
99
0
547
24
18
14
42
1.87
33802--33890
47
1.9
47
88
2
135
49
11
11
28
1.73
37819--37894
40
1.9
40
100
0
152
32
7
17
42
1.78
45594--45672
30
2.5
32
89
8
135
32
3
15
48
1.63
51965--52031
21
3.2
21
64
16
57
50
14
5
28
1.66
51952--52032
42
1.9
42
97
0
153
46
16
7
29
1.73
52098--52211
56
2.0
56
93
3
194
39
1
22
35
1.65
52600--52655
22
2.5
22
79
0
58
41
14
10
33
1.80
52941--53033
22
4.2
22
75
8
73
38
19
10
31
1.86
53021--53073
26
2.0
27
82
10
65
41
9
7
41
1.66
53116--53304
22
8.5
22
72
8
132
37
14
10
37
1.81
53205--53304
43
2.3
43
78
10
114
38
15
9
38
1.78
57932--57962
7
4.3
7
95
4
53
16
0
0
83
0.64
63498--63537
12
3.4
12
82
3
55
7
37
42
12
1.71
64860--64916
24
2.4
24
88
5
80
35
3
8
52
1.50
64860--64916
12
4.8
11
81
14
69
35
3
8
52
1.50
72832--72888
14
4.0
14
77
20
55
77
0
3
19
0.92

Tables:   1

The End!