Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020216.1 Corchorus olitorius cultivar O-4 contig20249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2254

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1444--1561
23
5.3
22
69
29
81
65
1
5
27
1.25
1437--1736
19
16.3
18
68
18
97
65
0
8
25
1.25
1437--1759
4
83.2
4
63
17
78
65
0
8
25
1.24
1449--1510
27
2.3
27
80
5
72
66
1
4
27
1.21
1457--1673
44
5.1
43
79
12
218
63
0
9
26
1.30
1537--1675
36
3.8
35
77
19
149
61
0
11
27
1.30
1487--1670
80
2.4
75
85
7
251
63
0
10
25
1.30
1703--1736
9
3.8
9
92
7
52
85
0
0
14
0.60
1688--1759
23
3.1
22
76
6
63
73
0
4
22
1.00

Tables:   1

The End!