Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020220.1 Corchorus olitorius cultivar O-4 contig20253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22475

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3169--3243
27
2.8
27
91
0
132
18
40
20
21
1.92
4419--4455
14
2.6
14
100
0
74
51
18
21
8
1.72
6254--6421
32
5.2
32
91
0
273
33
25
17
22
1.96
6558--6624
24
2.8
24
95
0
116
26
22
26
23
2.00
18361--18405
20
2.2
20
88
4
63
37
0
0
62
0.96

Tables:   1

The End!