Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020229.1 Corchorus olitorius cultivar O-4 contig20262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10638

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--227
25
1.9
24
95
4
85
55
8
6
29
1.55
218--298
39
2.0
40
92
2
137
37
3
8
50
1.51
1704--2025
126
2.5
126
87
4
454
30
19
13
37
1.89
2858--2963
54
1.9
55
88
9
162
33
27
24
14
1.94
3190--3242
6
8.7
6
81
4
61
66
1
28
3
1.20

Tables:   1

The End!