Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020238.1 Corchorus olitorius cultivar O-4 contig20271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58677

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5500--5547
13
3.7
13
77
0
60
16
22
37
22
1.94
9374--9428
24
2.3
24
78
12
60
16
7
20
56
1.63
12814--12855
2
21.0
2
95
0
75
47
0
2
50
1.14
12622--12840
114
1.9
114
89
8
343
40
5
18
36
1.74
14689--14813
42
3.0
42
97
0
232
35
7
13
44
1.72
26164--26199
16
2.2
16
90
0
54
58
2
0
38
1.13
38996--39037
22
1.9
22
100
0
84
42
14
7
35
1.73

Tables:   1

The End!