Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020248.1 Corchorus olitorius cultivar O-4 contig20281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21675

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162--222
25
2.3
27
78
15
74
1
22
0
75
0.89
262--291
14
2.1
14
100
0
60
0
6
0
93
0.35
266--290
13
1.9
13
100
0
50
0
4
0
96
0.24
260--292
16
2.0
17
94
5
59
0
9
0
90
0.44
7103--7137
15
2.4
15
85
4
54
45
8
20
25
1.79
19050--19553
248
2.0
251
86
3
712
36
15
22
26
1.93

Tables:   1

The End!