Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020256.1 Corchorus olitorius cultivar O-4 contig20289, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31622

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1022--1080
31
1.9
31
89
0
91
33
23
11
30
1.91
1358--1552
100
2.0
99
90
1
309
33
14
12
38
1.84
5744--5933
95
2.0
95
98
0
371
36
7
14
40
1.76
6097--6128
13
2.5
13
100
0
64
18
0
0
81
0.70
7446--7488
22
2.0
22
90
0
68
32
4
34
27
1.78
20078--20112
12
2.9
12
86
0
52
62
2
34
0
1.10
22767--22831
33
2.0
32
88
5
96
13
23
27
35
1.93

Tables:   1

The End!