Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020258.1 Corchorus olitorius cultivar O-4 contig20291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22914

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
729--779
25
2.1
24
88
3
75
31
7
3
56
1.46
1537--1571
17
2.1
17
89
10
54
45
2
5
45
1.41
1542--1580
17
2.4
17
86
4
53
48
0
2
48
1.15
2022--2062
2
20.5
2
100
0
82
48
0
0
51
1.00
4695--4739
4
11.0
4
95
4
81
51
0
0
48
1.00
4740--4769
2
15.0
2
100
0
60
50
0
0
50
1.00
11723--11806
43
2.1
38
85
14
109
34
10
2
52
1.49
12167--12192
6
4.3
6
100
0
52
69
30
0
0
0.89
15937--15961
12
2.1
12
100
0
50
16
24
16
44
1.86
18315--18365
7
7.3
7
73
8
50
1
17
3
76
1.03
20229--20367
69
2.0
69
94
0
242
29
25
15
29
1.96
20862--20937
36
2.1
36
100
0
152
26
7
32
32
1.85

Tables:   1

The End!