Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020261.1 Corchorus olitorius cultivar O-4 contig20294, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6331

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
188--228
22
2.0
21
85
9
57
53
2
9
34
1.47
272--317
22
2.0
23
91
4
76
19
15
21
43
1.87
1045--1117
31
2.5
28
77
18
69
41
13
26
19
1.88
2804--2831
4
7.0
4
100
0
56
25
0
0
75
0.81
4600--4624
12
2.1
12
100
0
50
56
0
8
36
1.29

Tables:   1

The End!