Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020273.1 Corchorus olitorius cultivar O-4 contig20306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6697

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1881--1963
22
3.8
21
73
17
64
57
1
2
38
1.19
1883--1931
25
2.0
25
84
8
64
59
0
0
40
0.98
2219--2274
26
2.2
26
83
0
67
30
23
5
41
1.76
2225--2275
26
2.0
26
88
0
75
29
19
5
45
1.74
3297--3375
37
2.1
38
88
4
115
36
17
8
36
1.81
6555--6687
31
4.3
31
100
0
266
18
25
30
26
1.98

Tables:   1

The End!