Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020277.1 Corchorus olitorius cultivar O-4 contig20310, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17944

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13336--13361
1
26.0
1
100
0
52
0
0
0
100
0.00
13553--13638
43
2.0
43
100
0
172
34
23
9
32
1.87
17141--17253
24
4.8
24
83
6
115
4
39
31
23
1.75
17142--17274
69
1.9
69
84
3
178
4
38
32
24
1.76
17187--17251
24
2.7
24
95
0
121
4
33
32
29
1.78
17213--17281
21
3.1
21
81
10
68
4
33
33
28
1.77
17128--17287
69
2.3
68
78
10
171
4
37
33
25
1.76

Tables:   1

The End!