Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020282.1 Corchorus olitorius cultivar O-4 contig20315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79384

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1053--1098
24
2.0
23
91
4
74
73
0
0
26
0.83
6439--6470
10
3.1
10
91
8
55
40
40
18
0
1.51
6812--6838
2
13.5
2
100
0
54
48
0
0
51
1.00
20828--20979
81
1.9
81
92
0
259
45
13
14
26
1.82
21037--21079
20
2.2
20
95
0
77
13
34
4
46
1.65
22942--22997
24
2.2
26
84
6
80
42
33
12
10
1.77
60346--60429
36
2.3
36
91
0
141
30
26
9
33
1.88
60904--60949
24
1.9
24
90
0
74
45
6
26
21
1.76
62255--62301
18
2.6
18
79
0
58
34
12
27
25
1.92
69195--69252
31
1.9
31
89
3
91
17
12
32
37
1.86
70624--70685
31
2.0
31
100
0
124
58
16
16
9
1.63
77844--78034
95
2.0
95
100
0
382
39
12
11
36
1.79

Tables:   1

The End!