Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020286.1 Corchorus olitorius cultivar O-4 contig20319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56242

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4268--4329
21
3.0
20
80
15
65
33
4
9
51
1.56
5935--5985
3
17.0
3
87
0
75
33
33
1
31
1.69
8781--8811
16
2.0
16
93
6
55
29
6
6
58
1.48
13336--13378
13
3.4
12
81
9
50
27
2
13
55
1.51
25484--25748
136
2.0
135
88
0
395
45
6
17
29
1.74
27921--27953
15
2.2
16
89
10
52
39
9
0
51
1.34
32301--32349
19
2.6
18
81
9
62
34
8
6
51
1.57
37371--37434
3
21.3
3
100
0
128
34
0
0
65
0.93
39373--39405
16
2.0
17
88
5
50
72
0
3
24
0.98
48195--48258
31
2.2
29
80
8
67
34
10
25
29
1.90

Tables:   1

The End!