Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: AWUE01020287.1 Corchorus olitorius cultivar O-4 contig20320, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 26542

Tables:   1   

This is table  1  of  1  ( 8 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6269--6704
220
2.0
220
99
0
863
32
15
16
36
1.90
9803--9892
46
2.0
46
82
4
110
43
20
10
26
1.83
15096--15135
18
2.2
18
95
0
71
55
17
17
10
1.69
17452--17491
15
2.6
16
88
4
55
15
10
12
62
1.54
23467--23503
18
2.0
20
89
10
60
37
5
29
27
1.79
24128--24412
32
8.9
32
91
0
419
29
20
18
31
1.97
25106--25222
33
3.5
33
82
6
139
13
31
13
41
1.84
25106--25238
33
4.0
33
82
1
133
13
30
14
41
1.84

Tables:   1   

The End!