Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020289.1 Corchorus olitorius cultivar O-4 contig20322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7314

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191--345
22
7.0
22
68
15
97
34
10
18
36
1.86
261--373
44
2.5
46
76
9
117
35
10
18
35
1.86
268--379
22
5.0
22
76
10
84
35
8
17
37
1.82
334--379
24
2.0
23
87
8
67
36
6
17
39
1.76
238--772
66
7.8
65
69
16
198
37
10
17
34
1.85
371--424
22
2.5
22
78
0
63
33
7
18
40
1.78
478--534
22
2.6
21
81
8
69
40
12
15
31
1.85
473--544
22
3.3
21
77
11
56
37
9
19
33
1.85
634--806
22
8.0
21
71
10
93
41
9
15
34
1.79
653--803
65
2.3
67
83
4
182
41
9
14
34
1.79
609--780
88
1.9
90
80
9
201
41
9
15
33
1.79
1662--1704
21
2.1
20
95
4
77
27
27
13
30
1.95
3559--3663
33
3.2
33
76
2
104
45
20
6
26
1.76
4572--4688
38
3.1
38
100
0
234
44
17
16
21
1.87

Tables:   1

The End!