Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020291.1 Corchorus olitorius cultivar O-4 contig20324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4751

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1368--1431
21
3.1
21
93
2
112
28
26
14
31
1.95
1594--2177
22
26.9
22
67
15
133
39
9
15
35
1.80
1575--1736
44
3.7
43
75
11
125
42
9
14
33
1.78
1595--1736
66
2.2
66
80
5
153
42
9
13
34
1.77
1741--1820
23
3.5
23
86
1
99
36
6
20
37
1.78
1594--2023
22
19.7
22
68
16
134
37
10
16
36
1.83

Tables:   1

The End!