Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020293.1 Corchorus olitorius cultivar O-4 contig20326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10503

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2290--2366
28
2.7
29
82
9
88
31
18
12
37
1.88
2867--2951
37
2.3
37
93
0
143
35
4
7
52
1.49
5048--5074
3
9.0
3
100
0
54
66
0
33
0
0.92
5190--5241
10
4.9
10
75
13
50
80
1
11
5
0.96
6260--6336
28
2.7
29
82
9
88
31
18
12
37
1.88
6836--6920
37
2.3
37
93
0
143
35
4
7
52
1.49
8905--8964
6
9.7
6
94
5
102
48
0
15
36
1.45
10087--10167
39
2.0
40
92
2
137
50
8
3
37
1.51

Tables:   1

The End!