Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020294.1 Corchorus olitorius cultivar O-4 contig20327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12873

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2225--2283
28
2.1
28
96
0
109
45
10
18
25
1.81
7914--8117
22
9.3
22
75
8
166
38
16
11
32
1.85
7914--8119
44
4.7
43
77
6
200
38
16
11
33
1.85
7914--8117
66
3.1
64
77
7
196
38
16
11
32
1.85
8345--8448
44
2.4
44
79
9
113
37
8
8
45
1.66
8415--8514
44
2.3
44
78
1
112
42
9
9
40
1.68
11096--11142
10
4.5
11
84
12
55
78
0
19
2
0.85
11097--11171
16
4.6
15
75
16
60
78
0
16
5
0.92
11097--11144
22
2.2
22
88
7
71
81
0
16
2
0.79
11097--11147
11
5.0
10
77
11
50
82
0
15
1
0.76

Tables:   1

The End!