Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020299.1 Corchorus olitorius cultivar O-4 contig20332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4993

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2055--2100
10
4.7
10
82
10
51
41
8
21
28
1.83
2156--2216
21
2.9
21
97
0
113
24
37
21
16
1.93
2199--2320
50
2.4
50
90
0
181
35
22
22
18
1.96
4475--4600
66
1.9
66
85
1
173
27
9
21
41
1.84
4490--4615
33
3.8
33
73
7
105
27
9
19
42
1.82

Tables:   1

The End!