Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020304.1 Corchorus olitorius cultivar O-4 contig20337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12607

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
799--1403
30
20.2
30
86
2
743
46
18
13
21
1.83
1713--1770
26
2.3
27
79
11
68
43
20
17
18
1.89
1745--2165
36
11.8
36
82
3
467
43
18
19
18
1.88
1747--2165
71
5.9
71
82
1
473
43
18
19
18
1.88
3714--3754
15
2.6
16
88
7
66
63
12
9
14
1.52
6408--6462
21
2.6
21
91
0
83
14
21
47
16
1.82
9820--9848
11
2.7
11
94
5
51
27
20
13
37
1.91

Tables:   1

The End!