Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020309.1 Corchorus olitorius cultivar O-4 contig20342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17093

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
676--700
13
1.9
13
100
0
50
48
0
8
44
1.32
738--765
14
2.0
14
100
0
56
28
7
7
57
1.52
6359--7353
438
2.3
426
83
6
1196
31
13
12
42
1.82
9393--9501
42
2.6
42
100
0
218
50
13
4
31
1.62
12166--12311
75
1.9
75
91
2
240
36
16
26
20
1.93
15622--15660
16
2.5
16
87
4
53
15
5
5
74
1.17
15601--15651
24
2.1
25
85
3
68
17
5
5
70
1.28
16468--16513
22
2.1
22
84
8
58
30
19
23
26
1.98

Tables:   1

The End!