Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020317.1 Corchorus olitorius cultivar O-4 contig20350, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23634

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10712--10768
27
2.1
28
87
9
84
36
7
15
40
1.75
10712--10768
14
4.3
12
79
18
60
36
7
15
40
1.75
11415--11455
16
2.5
17
76
11
50
80
0
19
0
0.71
11637--11686
16
3.2
15
80
8
55
62
2
34
2
1.18
11929--11977
19
2.4
21
76
10
57
40
8
12
38
1.72
12034--12083
21
2.3
21
79
6
55
76
2
18
4
1.04
13339--13562
50
4.5
50
93
1
344
27
15
21
35
1.94
13526--13602
37
2.1
38
95
2
138
36
18
22
23
1.95
13577--13685
54
2.0
54
83
0
137
28
14
22
33
1.94
13481--13660
91
2.0
86
82
7
209
30
17
21
30
1.96
14178--14228
19
2.7
19
81
3
59
13
15
31
39
1.87
16462--16572
41
2.7
41
87
1
143
23
11
16
48
1.78
18528--18698
89
1.9
88
85
1
234
26
15
27
30
1.96

Tables:   1

The End!