Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020320.1 Corchorus olitorius cultivar O-4 contig20353, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8241

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1049--1089
3
13.7
3
100
0
82
31
0
34
34
1.58
4280--4900
22
28.5
22
67
14
197
35
16
9
38
1.81
4606--4685
23
3.5
23
86
6
110
38
17
6
37
1.75
4629--4750
65
1.9
64
83
5
156
36
17
8
38
1.79
4916--5039
22
5.6
22
75
7
126
33
13
10
42
1.79
4913--5039
66
1.9
66
86
0
182
33
14
10
42
1.79
5954--6038
36
2.4
36
84
7
102
12
44
35
7
1.70

Tables:   1

The End!