Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020324.1 Corchorus olitorius cultivar O-4 contig20357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8381

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1774--1849
2
41.5
2
72
17
58
47
2
0
50
1.15
1777--1833
20
2.8
20
84
12
64
43
1
0
54
1.10
3610--3680
20
3.3
20
67
24
54
42
9
8
39
1.69
3606--3693
45
1.9
46
95
2
160
40
10
11
37
1.75
4324--4890
213
2.7
212
90
4
876
24
19
16
39
1.91
6351--6417
26
2.6
27
85
4
84
70
10
0
19
1.16

Tables:   1

The End!