Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020325.1 Corchorus olitorius cultivar O-4 contig20358, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19585

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3053--3077
13
1.9
13
100
0
50
16
0
0
84
0.63
5322--5354
13
2.5
13
95
0
57
42
6
18
33
1.75
5607--5682
35
2.2
35
85
0
98
18
22
21
38
1.94
9792--9817
3
8.7
3
100
0
52
34
0
0
65
0.93
11169--11215
6
7.7
6
95
4
85
0
14
0
85
0.61
17862--17902
21
1.9
22
85
5
57
9
17
29
43
1.80

Tables:   1

The End!