Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020328.1 Corchorus olitorius cultivar O-4 contig20361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70625

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1277--1413
31
4.4
31
83
0
148
18
24
25
31
1.97
25739--25997
135
2.0
123
85
8
338
37
9
1
50
1.44
25983--26021
14
2.9
13
80
3
51
41
2
2
53
1.28
26241--26288
15
3.1
15
79
8
53
43
4
2
50
1.33
26938--26997
31
1.9
31
86
0
84
35
6
5
53
1.49
29290--29319
11
2.6
11
94
5
51
30
6
6
56
1.51
29394--29447
26
2.1
26
82
6
65
50
3
5
40
1.44
30451--30492
19
2.2
19
91
0
66
42
14
0
42
1.45
34872--34915
14
3.1
14
93
0
79
6
0
50
43
1.29
39917--41527
804
2.0
803
98
0
3109
33
15
18
32
1.92
50368--50764
81
4.9
81
89
2
566
24
20
25
29
1.99
61370--61394
10
2.5
10
100
0
50
24
8
16
52
1.70
61510--61623
11
10.8
11
69
7
67
43
3
1
50
1.29
65214--65249
2
18.0
2
100
0
72
50
0
0
50
1.00
66267--66303
19
1.9
19
88
0
56
40
13
5
40
1.67

Tables:   1

The End!