Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020330.1 Corchorus olitorius cultivar O-4 contig20363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15597

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
862--1161
132
2.3
133
95
1
532
38
9
2
49
1.49
1865--1923
31
1.9
31
82
6
75
11
18
37
32
1.87
8840--8919
31
2.6
31
86
7
101
31
15
22
31
1.94
8869--8929
31
2.0
31
93
0
104
36
13
18
32
1.89
13767--13791
12
2.1
12
100
0
50
8
40
0
52
1.31

Tables:   1

The End!