Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020332.1 Corchorus olitorius cultivar O-4 contig20365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40488

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3714--3787
38
1.9
38
91
0
121
20
8
13
58
1.61
6015--6079
22
3.2
22
62
31
54
35
16
18
29
1.93
6014--6089
38
2.0
38
94
0
134
32
17
19
30
1.95
22542--22581
20
2.0
20
100
0
80
30
0
25
45
1.54
26930--26960
14
2.2
14
94
0
53
64
3
0
32
1.09
30671--30700
12
2.6
11
90
10
51
10
0
0
90
0.47
32336--32380
22
2.0
22
83
8
56
64
0
31
4
1.13

Tables:   1

The End!