Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020333.1 Corchorus olitorius cultivar O-4 contig20366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29801

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2159--2198
2
20.0
2
100
0
80
50
0
0
50
1.00
21867--22373
67
7.6
67
82
5
559
22
19
14
43
1.87
22146--22262
61
1.9
61
85
0
162
18
16
20
44
1.87
21867--22488
264
2.3
262
78
8
584
22
19
15
42
1.88
23507--23598
44
2.1
45
93
2
159
40
11
16
31
1.85
23842--23898
22
2.6
22
77
2
62
52
10
14
22
1.71
23839--23911
21
3.5
20
75
15
67
50
9
16
23
1.74
23926--24050
22
5.8
21
71
11
83
38
10
12
39
1.77

Tables:   1

The End!