Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020335.1 Corchorus olitorius cultivar O-4 contig20368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24270

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3308--3338
15
2.1
15
94
5
55
77
6
3
12
1.08
10749--10959
106
2.0
106
96
0
386
45
9
12
32
1.73
14006--14382
151
2.5
149
89
1
556
38
10
13
37
1.79
14999--15045
18
2.7
18
96
3
87
29
29
23
17
1.97
17206--17281
36
2.1
36
92
0
125
30
21
18
30
1.97
17243--17417
72
2.4
72
84
5
228
38
20
13
28
1.90
23362--23406
24
2.0
22
95
4
72
28
33
8
28
1.87

Tables:   1

The End!