Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020336.1 Corchorus olitorius cultivar O-4 contig20369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23529

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7097--7186
36
2.5
36
96
0
162
33
12
14
40
1.83
10521--10607
37
2.6
33
85
12
108
48
5
20
25
1.72
12727--12858
66
2.0
66
98
0
255
23
22
21
31
1.98
13407--13433
13
2.1
13
100
0
54
29
14
29
25
1.95
13433--13513
42
1.9
42
94
0
144
18
14
30
35
1.91
13606--13662
28
2.0
28
96
0
105
35
10
15
38
1.82
13760--13842
26
3.2
26
63
24
66
21
16
27
33
1.95
13765--13851
29
3.2
29
63
24
80
22
14
28
33
1.94
13712--13854
52
2.8
52
93
5
242
21
15
28
34
1.94
15457--15506
1
50.0
1
79
0
55
90
8
2
0
0.54
15457--15503
10
4.7
10
94
0
85
89
8
2
0
0.57
16164--16201
20
2.0
20
89
5
60
26
0
18
55
1.43
20161--20941
390
2.0
390
93
3
1337
25
25
17
31
1.97

Tables:   1

The End!