Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020337.1 Corchorus olitorius cultivar O-4 contig20370, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18336

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--113
30
2.0
31
93
3
104
45
15
8
31
1.75
500--539
15
2.6
16
88
4
55
62
12
10
15
1.54
8948--9015
31
2.2
32
84
7
86
11
20
32
35
1.89
8969--9027
31
1.9
31
82
6
75
11
18
37
32
1.87
9108--9154
26
1.9
23
83
12
58
38
4
6
51
1.47
10707--10749
5
8.2
5
97
2
68
58
0
0
41
0.98
14640--14671
11
2.9
11
95
0
55
46
12
0
40
1.42
18215--18248
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!