Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020356.1 Corchorus olitorius cultivar O-4 contig20389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27134

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
100
0
72
0
50
0
50
1.00
18022--18048
12
2.2
12
100
0
54
14
14
18
51
1.76
18677--18719
22
2.0
22
90
9
70
41
11
18
27
1.85
19466--19502
18
2.1
18
100
0
74
56
5
10
27
1.55
24933--25042
58
1.9
58
84
3
150
32
13
20
33
1.91
26311--26380
36
1.9
36
88
5
106
22
10
7
60
1.53

Tables:   1

The End!