Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020363.1 Corchorus olitorius cultivar O-4 contig20396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39880

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3091--3123
5
6.8
5
93
6
59
81
0
18
0
0.68
3092--3122
9
3.3
9
95
4
53
80
0
19
0
0.71
3091--3123
14
2.3
15
94
5
59
81
0
18
0
0.68
18641--18669
2
14.5
2
100
0
58
51
48
0
0
1.00
27881--27933
17
3.1
17
94
2
88
49
5
16
28
1.69
28212--28345
45
3.0
45
86
0
196
26
13
21
38
1.91
28302--28611
132
2.3
134
90
1
489
27
12
21
38
1.90
31374--31407
13
2.6
13
90
9
52
11
11
29
47
1.76

Tables:   1

The End!