Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020364.1 Corchorus olitorius cultivar O-4 contig20397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3899

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--117
35
2.0
35
97
0
133
42
16
16
23
1.89
287--389
22
4.8
21
69
14
68
33
12
13
40
1.82
313--419
44
2.4
44
79
3
117
34
14
14
36
1.87
745--780
17
2.1
17
94
0
63
30
5
22
41
1.76
1638--1984
120
2.9
118
91
4
585
33
7
23
35
1.83

Tables:   1

The End!