Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020367.1 Corchorus olitorius cultivar O-4 contig20400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1609

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--231
35
6.5
35
91
2
323
26
13
19
41
1.87
3--231
106
2.1
107
87
2
327
26
13
19
41
1.87
197--744
54
10.2
54
83
4
385
27
18
22
30
1.98
197--744
108
5.1
108
82
4
567
27
18
22
30
1.98
197--744
162
3.4
160
81
6
572
27
18
22
30
1.98

Tables:   1

The End!