Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020372.1 Corchorus olitorius cultivar O-4 contig20405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8574

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1083--1147
34
1.9
34
96
0
121
27
7
21
43
1.80
3653--3709
25
2.4
24
82
5
71
57
5
5
31
1.43
5102--5150
19
2.7
18
78
6
55
69
8
16
6
1.33
5426--5580
67
2.2
72
86
7
216
23
29
25
21
1.99
5426--5582
35
4.6
33
81
7
172
23
29
24
22
1.99
6882--6952
25
2.8
25
95
0
124
19
21
29
29
1.98
7223--7273
2
26.0
2
76
11
52
45
5
1
47
1.38

Tables:   1

The End!