Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020374.1 Corchorus olitorius cultivar O-4 contig20407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23458

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4886--4960
38
2.0
38
89
5
116
33
14
18
33
1.91
13819--13860
17
2.5
17
100
0
84
21
23
0
54
1.44
20197--20267
35
2.0
35
86
5
99
54
8
8
28
1.59
21424--21481
21
2.9
19
76
5
62
41
13
17
27
1.87
23022--23084
31
2.0
32
90
3
101
28
17
20
33
1.95

Tables:   1

The End!