Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020378.1 Corchorus olitorius cultivar O-4 contig20411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17699

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--742
9
4.0
9
86
6
56
10
18
5
64
1.43
707--746
19
2.1
19
95
0
71
10
15
7
67
1.41
5936--5970
10
3.4
10
88
7
52
77
8
2
11
1.10
8983--9063
30
2.5
33
75
17
89
44
3
2
49
1.33
8992--9049
30
2.0
30
89
3
91
44
3
1
50
1.29
9130--9160
11
2.7
11
95
5
53
48
9
16
25
1.76
9761--9854
45
2.2
43
90
7
147
38
22
5
34
1.77
11598--11683
31
2.9
29
86
8
111
26
19
13
39
1.90
11598--11683
29
2.9
29
87
6
111
26
19
13
39
1.90
11947--12018
26
2.7
27
81
10
85
33
15
0
51
1.44
12901--12936
18
2.0
18
100
0
72
66
5
11
16
1.40
17256--17298
22
2.0
21
90
4
68
2
16
0
81
0.79

Tables:   1

The End!