Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020379.1 Corchorus olitorius cultivar O-4 contig20412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23798

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3124--3522
199
2.0
199
94
1
703
26
14
18
40
1.90
6531--6648
57
2.1
57
98
0
227
38
27
9
24
1.86
6996--7074
32
2.4
32
91
6
124
18
21
22
36
1.95
7075--7115
9
4.6
9
82
11
57
0
43
2
53
1.13
7145--7209
19
3.3
19
72
8
58
40
9
24
26
1.85
7474--7567
3
34.3
3
70
26
50
63
0
34
2
1.06
7474--7573
13
8.0
13
81
7
118
64
0
34
2
1.05
7474--7572
37
2.8
36
81
12
114
64
0
33
2
1.05
7474--7573
50
2.0
50
96
0
182
64
0
34
2
1.05
8748--9043
101
2.9
101
89
1
450
32
19
19
28
1.96
16367--16656
147
2.0
148
99
0
573
13
21
31
34
1.92
19328--19387
30
2.0
30
100
0
120
30
6
30
33
1.83
20466--20509
22
2.0
22
95
0
79
31
25
9
34
1.87

Tables:   1

The End!