Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020381.1 Corchorus olitorius cultivar O-4 contig20414, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51048

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10840--10874
11
3.2
11
91
0
61
0
25
11
62
1.28
13122--13227
29
3.6
29
65
14
72
34
14
16
33
1.89
13119--13251
60
2.2
59
85
2
185
36
14
17
32
1.90
18068--18104
12
2.9
12
92
8
56
45
16
0
37
1.47
23707--23757
26
2.0
26
81
7
61
9
23
1
64
1.34
28612--28670
19
3.0
19
80
9
73
37
13
20
28
1.91
30180--30207
3
9.3
3
100
0
56
67
0
0
32
0.91
36129--36173
21
2.1
21
100
0
90
46
11
22
20
1.81
39723--39804
42
2.0
42
90
0
128
39
15
15
29
1.89
39986--40035
26
1.9
26
83
0
64
40
12
18
30
1.86
40169--40212
13
3.4
13
100
0
88
36
22
25
15
1.94
43813--43868
29
1.9
29
85
0
76
28
14
8
48
1.74
47375--47407
16
2.1
16
100
0
66
42
6
21
30
1.77
49629--49686
29
2.0
30
86
3
82
51
1
3
43
1.28
50953--51045
3
31.0
3
100
0
186
66
0
0
33
0.92

Tables:   1

The End!