Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020384.1 Corchorus olitorius cultivar O-4 contig20417, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20453

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5061--5106
24
2.0
22
88
12
67
23
10
13
52
1.71
6112--6170
27
2.2
26
82
5
73
44
32
10
13
1.77
6121--6173
27
2.0
27
92
0
88
43
32
11
13
1.79
8755--8950
106
1.8
107
87
2
295
22
15
16
45
1.85
16725--17478
333
2.3
331
84
5
959
36
16
14
32
1.90
18723--18750
13
2.2
13
100
0
56
57
7
7
28
1.52
18091--19568
331
4.5
318
78
9
1070
36
15
14
33
1.88
18037--19564
663
2.3
639
79
9
1641
36
15
14
33
1.88
19957--19986
15
1.9
16
93
6
53
53
3
0
43
1.17

Tables:   1

The End!