Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020386.1 Corchorus olitorius cultivar O-4 contig20419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19673

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--664
16
2.0
16
93
0
55
31
6
40
21
1.78
11632--11797
31
5.6
30
70
16
139
33
21
19
25
1.97
11636--11796
59
2.7
59
94
4
281
34
21
19
24
1.97
11838--11943
31
3.5
31
72
14
121
24
20
21
33
1.97
13105--13277
85
2.0
84
95
1
310
36
17
10
34
1.84
14692--14725
7
4.9
7
86
13
52
82
0
0
17
0.67
14692--14725
13
2.4
15
85
14
54
82
0
0
17
0.67
14688--14720
16
2.1
16
88
11
50
81
0
0
18
0.68
15119--15190
25
2.7
26
82
8
83
48
12
1
37
1.50
17631--17703
24
3.0
24
89
0
110
9
17
27
45
1.80
17803--17854
18
2.9
18
85
0
77
44
26
1
26
1.65

Tables:   1

The End!