Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020394.1 Corchorus olitorius cultivar O-4 contig20427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9343

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2114--2143
15
1.9
16
93
6
53
53
3
0
43
1.17
3141--3196
28
2.1
26
83
6
67
64
0
3
32
1.11
4658--4707
25
2.0
26
96
4
93
54
4
4
38
1.38
4842--4907
27
2.4
27
80
12
73
43
3
9
43
1.51
5248--5937
351
2.0
351
88
2
1021
34
17
17
30
1.93
6351--9278
336
8.8
331
74
10
1706
36
15
14
32
1.89
6351--9331
668
4.5
664
74
11
1742
36
15
14
32
1.88

Tables:   1

The End!