Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020400.1 Corchorus olitorius cultivar O-4 contig20433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18175

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6492--6517
2
13.0
2
100
0
52
50
0
0
50
1.00
7122--8301
331
3.6
325
78
9
1133
33
13
15
36
1.88
8658--9804
330
3.5
325
79
7
1136
33
13
15
36
1.88
9290--9902
319
1.9
314
80
7
711
32
14
15
36
1.89
10205--11282
329
3.3
323
79
9
977
33
14
15
36
1.88
11298--12932
825
2.0
823
89
5
2489
32
16
16
35
1.91
12494--13434
328
2.9
324
78
7
927
33
15
15
35
1.89
14057--14941
323
2.7
323
79
7
865
32
15
15
36
1.89
14660--15245
311
1.9
308
81
8
708
33
15
15
34
1.89
17107--18049
331
2.9
331
80
7
1031
32
14
15
37
1.88

Tables:   1

The End!