Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020420.1 Corchorus olitorius cultivar O-4 contig20453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5863

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
713--779
26
2.5
27
90
2
100
34
7
17
40
1.78
993--1070
33
2.4
33
91
0
120
32
6
17
43
1.75
1123--1379
54
4.7
55
79
7
226
31
21
17
28
1.96
1411--1452
18
2.3
18
83
0
57
52
9
14
23
1.71
1486--2162
37
18.3
37
78
2
644
43
15
17
23
1.87
2946--3189
87
2.8
87
94
0
407
27
23
11
37
1.90
3310--3374
26
2.5
27
80
12
73
1
13
4
80
0.95
4008--4078
14
5.3
13
85
14
83
39
14
8
38
1.76

Tables:   1

The End!