Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020422.1 Corchorus olitorius cultivar O-4 contig20455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27804

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
37--87
2
25.5
2
100
0
102
0
0
49
50
1.00
1068--1092
6
4.2
6
100
0
50
48
32
0
20
1.50
7862--7947
40
2.2
40
89
0
127
24
29
12
33
1.92
8738--9005
22
12.2
22
69
12
131
38
16
10
35
1.82
8859--9005
66
2.3
62
83
14
167
38
14
8
39
1.76
8593--9055
22
21.1
22
68
15
115
38
16
7
36
1.78
8859--9020
63
2.5
63
80
15
158
38
14
7
40
1.74
14058--14098
2
20.5
2
100
0
82
51
0
0
48
1.00
19361--19444
36
2.3
36
82
8
116
27
11
35
25
1.91
19524--19776
102
2.5
102
84
8
331
24
14
32
29
1.94
24899--24929
1
31.0
1
100
0
62
0
0
0
100
0.00

Tables:   1

The End!