Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020423.1 Corchorus olitorius cultivar O-4 contig20456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9596

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
435--506
27
2.6
29
84
8
103
36
31
16
15
1.90
1024--1179
30
5.2
30
89
1
251
49
17
14
19
1.80
1151--1247
38
2.6
38
88
0
122
48
18
15
17
1.81
1537--2465
35
26.5
35
82
4
942
40
19
20
19
1.91
1542--2465
318
2.9
313
82
3
1041
40
19
20
19
1.91
4096--4128
16
2.1
16
94
5
59
33
6
6
54
1.50

Tables:   1

The End!