Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020427.1 Corchorus olitorius cultivar O-4 contig20460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14253

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3657--3692
16
2.2
16
90
0
54
30
38
5
25
1.78
5169--5207
21
1.9
21
89
5
62
12
12
25
48
1.77
5463--5619
77
2.0
77
97
0
296
40
3
12
43
1.60
5505--5628
35
3.3
35
70
24
110
38
5
13
41
1.68
5860--5953
25
4.0
24
71
18
74
14
14
25
44
1.84
6279--6309
2
16.0
2
93
6
55
51
0
0
48
1.00
14198--14253
2
28.0
2
100
0
112
50
0
50
0
1.00

Tables:   1

The End!