Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020428.1 Corchorus olitorius cultivar O-4 contig20461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27033

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14985--15019
2
17.5
2
100
0
70
51
0
0
48
1.00
15985--16045
27
2.3
26
83
16
72
49
1
4
44
1.33
16531--16584
29
1.9
28
88
7
83
46
12
0
40
1.42
17235--17319
44
1.9
44
85
4
118
43
9
9
37
1.69
17885--17925
21
2.0
21
85
0
55
43
0
0
56
0.99
22011--22053
22
2.0
22
86
9
61
48
0
2
48
1.14
21997--22105
38
2.8
40
74
8
102
40
0
2
56
1.13
22002--22100
18
5.2
18
70
10
63
41
0
2
56
1.11

Tables:   1

The End!